number of long time-steps number of short time-steps size of long time-steps second size of short time-steps second time stamp assigned to model initilization days since 1948-01-01 00:00:00 number of time-steps between history records number of time-steps between the creation of history files number of time-steps between restart records only latest two records are maintained starting time-step for accumulation of time-averaged fields number of time-steps between time-averaged records number of time-steps between the creation of average files starting time-step for accumulation of diagnostic fields number of time-steps between diagnostic records number of time-steps between the creation of diagnostic files Power-law shape barotropic filter parameter Power-law shape barotropic filter parameter Power-law shape barotropic filter parameter background vertical mixing coefficient for tracers meter2 second-1 background vertical mixing coefficient for momentum meter2 second-1 background vertical mixing coefficient for turbulent energy meter2 second-1 background vertical mixing coefficient for length scale meter2 second-1 linear drag coefficient meter second-1 quadratic drag coefficient bottom roughness meter surface roughness meter stability exponent turbulent kinetic energy exponent turbulent length scale exponent stability coefficient shear production coefficient dissipation coefficient buoyancy production coefficient (minus) buoyancy production coefficient (plus) constant Schmidt number for TKE constant Schmidt number for PSI minimum value of specific turbulent kinetic energy minimum Value of dissipation Charnok factor for surface roughness wave amplitude factor for surface roughness surface flux from wave dissipation surface flux due to Craig and Banner wave breaking free-surface nudging/relaxation inverse time scale day-1 2D momentum nudging/relaxation inverse time scale day-1 3D momentum nudging/relaxation inverse time scale day-1 Tracers nudging/relaxation inverse time scale day-1 free-surface inflow, nudging inverse time scale second-1 free-surface outflow, nudging inverse time scale second-1 2D momentum inflow, nudging inverse time scale second-1 2D momentum outflow, nudging inverse time scale second-1 tracers inflow, nudging inverse time scale second-1 tracers outflow, nudging inverse time scale second-1 3D momentum inflow, nudging inverse time scale second-1 3D momentum outflow, nudging inverse time scale second-1 mean density used in Boussinesq approximation kilogram meter-3 slipperiness parameter grid type logical switch 0 1 Cartesian spherical domain length in the XI-direction meter domain length in the ETA-direction meter vertical terrain-following transformation equation vertical terrain-following stretching function S-coordinate surface control parameter S-coordinate bottom control parameter S-coordinate surface/bottom layer width meter S-coordinate parameter, critical depth meter S-coordinate at RHO-points -1.000000000000000 0.000000000000000 up ocean_s_coordinate_g2 s: s_rho C: Cs_r eta: zeta depth: h depth_c: hc s_rho, scalar S-coordinate at W-points -1.000000000000000 0.000000000000000 up ocean_s_coordinate_g2 s: s_w C: Cs_w eta: zeta depth: h depth_c: hc s_w, scalar S-coordinate stretching curves at RHO-points -1.000000000000000 0.000000000000000 Cs_r, scalar S-coordinate stretching curves at W-points -1.000000000000000 0.000000000000000 Cs_w, scalar bathymetry at RHO-points meter lon_rho lat_rho bath, scalar Coriolis parameter at RHO-points second-1 lon_rho lat_rho coriolis, scalar curvilinear coordinate metric in XI meter-1 lon_rho lat_rho pm, scalar curvilinear coordinate metric in ETA meter-1 lon_rho lat_rho pn, scalar longitude of RHO-points degree_east longitude lon_rho, scalar latitude of RHO-points degree_north latitude lat_rho, scalar longitude of U-points degree_east longitude lon_u, scalar latitude of U-points degree_north latitude lat_u, scalar longitude of V-points degree_east longitude lon_v, scalar latitude of V-points degree_north latitude lat_v, scalar longitude of PSI-points degree_east longitude lon_psi, scalar latitude of PSI-points degree_north latitude lat_psi, scalar angle between XI-axis and EAST radians lon_rho lat_rho angle, scalar mask on RHO-points 0.000000000000000 1.000000000000000 land water lon_rho lat_rho mask on U-points 0.000000000000000 1.000000000000000 land water lon_u lat_u mask on V-points 0.000000000000000 1.000000000000000 land water lon_v lat_v mask on psi-points 0.000000000000000 1.000000000000000 land water lon_psi lat_psi averaged time since initialization seconds since 1948-01-01 00:00:00 gregorian time, scalar, series time-averaged free-surface meter ocean_time lon_rho lat_rho ocean_time free-surface, scalar, series 9.99999993e+36 time-averaged vertically integrated u-momentum component meter second-1 ocean_time lon_u lat_u ocean_time ubar-velocity, scalar, series 9.99999993e+36 time-averaged vertically integrated v-momentum component meter second-1 ocean_time lon_v lat_v ocean_time vbar-velocity, scalar, series 9.99999993e+36 time-averaged u-momentum component meter second-1 ocean_time lon_u lat_u s_rho ocean_time u-velocity, scalar, series 9.99999993e+36 time-averaged v-momentum component meter second-1 ocean_time lon_v lat_v s_rho ocean_time v-velocity, scalar, series 9.99999993e+36 time-averaged S-coordinate vertical momentum component meter3 second-1 ocean_time lon_rho lat_rho s_w ocean_time omega, scalar, series 9.99999993e+36 time-averaged vertical momentum component meter second-1 ocean_time lon_rho lat_rho s_w ocean_time w-velocity, scalar, series 9.99999993e+36 time-averaged potential temperature Celsius ocean_time lon_rho lat_rho s_rho ocean_time temperature, scalar, series 9.99999993e+36 time-averaged salinity ocean_time lon_rho lat_rho s_rho ocean_time salinity, scalar, series 9.99999993e+36 time-averaged nitrate concentration millimole_nitrogen meter-3 ocean_time lon_rho lat_rho s_rho ocean_time NO3, scalar, series 9.99999993e+36 time-averaged phytoplankton concentration millimole_nitrogen meter-3 ocean_time lon_rho lat_rho s_rho ocean_time phytoplankton, scalar, series 9.99999993e+36 time-averaged zooplankton concentration millimole_nitrogen meter-3 ocean_time lon_rho lat_rho s_rho ocean_time zooplankton, scalar, series 9.99999993e+36 time-averaged detritus concentration millimole_nitrogen meter-3 ocean_time lon_rho lat_rho s_rho ocean_time detritus, scalar, series 9.99999993e+36 time-averaged ammonium concentration millimole_nitrogen meter-3 ocean_time lon_rho lat_rho s_rho ocean_time NH4, scalar, series 9.99999993e+36 time-averaged phosphate concentration millimole_PO4 meter-3 ocean_time lon_rho lat_rho s_rho ocean_time PO4, scalar, series 9.99999993e+36 time-averaged phytoplankton, nitrogen group millimole_N meter-3 ocean_time lon_rho lat_rho s_rho ocean_time Phy_N, scalar, series 9.99999993e+36 time-averaged phytoplankton, phosphorus group millimole_P meter-3 ocean_time lon_rho lat_rho s_rho ocean_time Phy_P, scalar, series 9.99999993e+36 time-averaged small fraction nitrogen detritus concentration millimole_nitrogen meter-3 ocean_time lon_rho lat_rho s_rho ocean_time SdetritusN, scalar, series 9.99999993e+36 time-averaged small fraction phosphorus detritus concentration millimole_phosphorus meter-3 ocean_time lon_rho lat_rho s_rho ocean_time SdetritusP, scalar, series 9.99999993e+36 time-averaged zooplankton concentration millimole_nitrogen meter-3 ocean_time lon_rho lat_rho s_rho ocean_time zooplankton, scalar, series 9.99999993e+36 time-averaged zooplankton concentration millimole_phosphorus meter-3 ocean_time lon_rho lat_rho s_rho ocean_time zooplankton, scalar, series 9.99999993e+36 time-averaged chlorophyll concentration milligrams_chlorophyll meter-3 ocean_time lon_rho lat_rho s_rho ocean_time chlorophyll, scalar, series 9.99999993e+36 time-averaged total alkalinity milliequivalents meter-3 ocean_time lon_rho lat_rho s_rho ocean_time alkalinity, scalar, series 9.99999993e+36 time-averaged silicate concentration millimole_silica meter-3 ocean_time lon_rho lat_rho s_rho ocean_time SiOH4, scalar, series 9.99999993e+36 time-averaged diatom biomass millimole_nitrogen meter-3 ocean_time lon_rho lat_rho s_rho ocean_time diatom, scalar, series 9.99999993e+36 time-averaged diatom N biomass millimole_nitrogen meter-3 ocean_time lon_rho lat_rho s_rho ocean_time diatom N, scalar, series 9.99999993e+36 time-averaged diatom P biomass millimole_phosphorus meter-3 ocean_time lon_rho lat_rho s_rho ocean_time diatom P, scalar, series 9.99999993e+36 time-averaged diatom Si biomass millimole_si meter-3 ocean_time lon_rho lat_rho s_rho ocean_time diatom Si, scalar, series 9.99999993e+36 time-averaged chlorophyll diatoms concentration milligrams_chlorophyll meter-3 ocean_time lon_rho lat_rho s_rho ocean_time chlorophyll_diatoms, scalar, series 9.99999993e+36 time-averaged dissolved oxygen concentration millimole_oxygen meter-3 ocean_time lon_rho lat_rho s_rho ocean_time Oxygen, scalar, series 9.99999993e+36 time-averaged 2D potential vorticity meter-1 second-1 ocean_time lon_psi lat_psi ocean_time pvorticity_bar, scalar, series 9.99999993e+36 time-averaged 2D relative vorticity second-1 ocean_time lon_psi lat_psi ocean_time rvorticity_bar, scalar, series 9.99999993e+36 time-averaged potential vorticity meter-1 second-1 ocean_time lon_psi lat_psi s_rho ocean_time pvorticity, scalar, series 9.99999993e+36 time-averaged relative vorticity second-1 ocean_time lon_psi lat_psi s_rho ocean_time rvorticity, scalar, series 9.99999993e+36 time-averaged vertical viscosity coefficient meter2 second-1 ocean_time lon_rho lat_rho s_w ocean_time AKv, scalar, series time-averaged temperature vertical diffusion coefficient meter2 second-1 ocean_time lon_rho lat_rho s_w ocean_time AKt, scalar, series time-averaged salinity vertical diffusion coefficient meter2 second-1 ocean_time lon_rho lat_rho s_w ocean_time AKs, scalar, series time-averaged surface net heat flux watt meter-2 upward flux, cooling downward flux, heating ocean_time lon_rho lat_rho ocean_time surface heat flux, scalar, series 9.99999993e+36 time-averaged surface net salt flux, (E-P)*SALT meter second-1 upward flux, freshening (net precipitation) downward flux, salting (net evaporation) ocean_time lon_rho lat_rho ocean_time surface net salt flux, scalar, series 9.99999993e+36 time-averaged surface u-momentum stress newton meter-2 ocean_time lon_u lat_u ocean_time surface u-momentum stress, scalar, series 9.99999993e+36 time-averaged surface v-momentum stress newton meter-2 ocean_time lon_v lat_v ocean_time surface v-momentum stress, scalar, series 9.99999993e+36 /cluster/shared/arcticfjord/A4_S4K/ocean_avg_3231.nc netCDF-3 64bit offset file CF-1.4 ROMS/TOMS nonlinear model averages file ROMS 3.6 - S800 - Coupled ROMS-CICE /cluster/shared/arcticfjord/A4_S4K/ocean_rst.nc /cluster/shared/arcticfjord/A4_S4K/ocean_his /cluster/shared/arcticfjord/A4_S4K/ocean_avg /cluster/shared/arcticfjord/A4_S4K/ocean_dia.nc /cluster/shared/arcticfjord/input_data/s800_cice_processed_a4_mod/arctic4km_grd_svalbard.nc /cluster/shared/arcticfjord/input_data/rst/ocean_rst_2014-10-01_with_bgc_Betzy_corr_AW.nc /cluster/shared/arcticfjord/input_data/s800_cice_processed_a4_mod/era5_a4_svalbard_2014.nc, /cluster/shared/arcticfjord/input_data/s800_cice_processed_a4_mod/era5_a4_svalbard_2015.nc /cluster/shared/arcticfjord/input_data/s800_cice_processed_a4_mod/era5_a4_svalbard_prec_2014.nc, /cluster/shared/arcticfjord/input_data/s800_cice_processed_a4_mod/era5_a4_svalbard_prec_2015.nc /cluster/shared/arcticfjord/input_data/s800_cice_processed_a4_mod/tide_svalbard.nc /cluster/shared/arcticfjord/OBC/data/bry_2014.nc, /cluster/shared/arcticfjord/OBC/data/bry_2015.nc /cluster/shared/arcticfjord/input_data/A4_S4K/clima_2015.nc /cluster/work/users/pduarte/tmproms/run/SA4/roms.in /cluster/home/pduarte/models/metroms/apps/common/include/ecodynamo.in EDGE: WEST SOUTH EAST NORTH zeta: Cha Cha Cha Cha ubar: Fla Fla Fla Fla vbar: Fla Fla Fla Fla u: RadNud RadNud RadNud RadNud v: RadNud RadNud RadNud RadNud temp: RadNud RadNud RadNud RadNud salt: RadNud RadNud RadNud RadNud NO3: RadNud RadNud RadNud RadNud phytoplankton: RadNud RadNud RadNud RadNud zooplankton: RadNud RadNud RadNud RadNud detritus: RadNud RadNud RadNud RadNud NH4: RadNud RadNud RadNud RadNud PO4: RadNud RadNud RadNud RadNud Phy_N: RadNud RadNud RadNud RadNud Phy_P: RadNud RadNud RadNud RadNud SdetritusN: RadNud RadNud RadNud RadNud SdetritusP: RadNud RadNud RadNud RadNud zooplanktonN: RadNud RadNud RadNud RadNud zooplanktonP: RadNud RadNud RadNud RadNud chlorophyll: RadNud RadNud RadNud RadNud alkalinity: RadNud RadNud RadNud RadNud SiOH4: RadNud RadNud RadNud RadNud diatom: RadNud RadNud RadNud RadNud diatomN: RadNud RadNud RadNud RadNud diatomP: RadNud RadNud RadNud RadNud diatomSi: RadNud RadNud RadNud RadNud chlorophyll_diatoms: RadNud RadNud RadNud RadNud oxygen: RadNud RadNud RadNud RadNud tke: Gra Gra Gra Gra https://www.myroms.org/svn/omlab/branches/kate Unversioned directory /cluster/work/users/pduarte/tmproms/roms_src /cluster/home/pduarte/models2/metroms/apps/SA4/include sa4.h Linux x86_64 ifort /cluster/software/OpenMPI/4.0.5-iccifort-2020.4.304/bin/mpif90 -mcmodel=large -xHOST -fpp -ip -O3 -g -I/cluster/work/users/pduarte/tmproms/roms_src/../run/SA4/cice/rundir_cpkg/compile -I/cluster/work/users/pduarte/tmproms 024x016 ROMS/TOMS, Version 3.6, Friday - March 15, 2024 - 8:05:34 AM ROMS/Functionals/ana_btflux.h, /cluster/home/pduarte/models2/metroms/apps/SA4/include/ana_nudgcoef.h, /cluster/home/pduarte/models2/metroms/apps/SA4/include/ana_srflux.h, ROMS/Functionals/ana_stflux.h ROMS/Nonlinear/Biology/ecodynamo.h SA4, ADD_FSOBC, ADD_M2OBC, ALBEDO, ATM_PRESS, ANA_BPFLUX, ANA_BSFLUX, ANA_BTFLUX, ANA_SPFLUX, ANA_SRFLUX, ASSUMED_SHAPE, AVERAGES, BULK_FLUXES, COOL_SKIN, CURVGRID, DIAGNOSTICS_BIO, DIAGNOSTICS_TS, DIAGNOSTICS_UV, DJ_GRADPS, DOUBLE_PRECISION, EMINUSP, GLS_MIXING, LONGWAVE, M2CLIMATOLOGY, M3CLIMATOLOGY, M3CLM_NUDGING, MASKING, MCT_LIB, MPI, NONLINEAR, NONLIN_EOS, NO_LBC_ATT, ECODYNAMO, N2S2_HORAVG, PERFECT_RESTART, POWER_LAW, PROFILE, K_GSCHEME, !RST_SINGLE, SALINITY, SOLAR_SOURCE, SOLVE3D, SPLINES, SSH_TIDES, TCLIMATOLOGY, TCLM_NUDGING, TS_U3HADVECTION, TS_C4VADVECTION, UV_ADV, UV_COR, UV_U3HADVECTION, UV_C4VADVECTION, UV_QDRAG, UV_TIDES, VAR_RHO_2D ocean_time